STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GZMBGranzyme B. (281 aa)    
Predicted Functional Partners:
PRF1
Perforin 1.
   
 0.919
GNLY
Granulysin.
   
  
 0.907
DFFA
DNA fragmentation factor subunit alpha.
    
 0.865
PARP1
poly(ADP-ribose) polymerase 1.
   
 0.864
BID
BH3 interacting domain death agonist.
    
 0.861
CASP8
Caspase 8.
    
 0.854
NKG7
Natural killer cell granule protein 7.
   
  
 0.848
CASP7
Caspase 7.
    
 0.836
TUBA1C
Tubulin alpha 1c.
    
  0.832
TUBAL3
Tubulin alpha like 3.
    
  0.832
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.