STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCAMP2Secretory carrier membrane protein 2. (329 aa)    
Predicted Functional Partners:
GPR108
G protein-coupled receptor 108.
   
    0.742
NET1
Neuroepithelial cell transforming 1.
    
 
 0.549
HDDC3
HD domain containing 3.
      
 0.527
ARF6
ADP ribosylation factor 6.
    
 
 0.503
ITSN2
Intersectin 2.
    
 
 0.443
PARP1
poly(ADP-ribose) polymerase 1.
      
 0.432
SCCPDH
Saccharopine dehydrogenase (putative).
      
 0.424
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 
 0.414
ARHGEF3
Rho guanine nucleotide exchange factor 3.
    
 
 0.409
SCAMP1
Secretory carrier membrane protein 1.
  
 
  
0.409
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.