STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF113ARing finger protein 113A. (343 aa)    
Predicted Functional Partners:
DHX16
DEAH-box helicase 16.
    
 0.982
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.981
SNIP1
Smad nuclear interacting protein 1.
   
 0.981
SF3B1
Splicing factor 3b subunit 1.
    
 0.981
LOC111530824
Spliceosome-associated protein CWC27 homolog.
    
 0.976
CWC27
CWC27 spliceosome associated cyclophilin.
    
 0.976
SF3A3
Splicing factor 3a subunit 3.
   
 0.976
LOC111532629
Probable splicing factor 3A subunit 1.
    
 0.975
ENSPTEP00000002102
annotation not available
    
 0.975
ENSPTEP00000008603
annotation not available
   
 0.975
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.