STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTA1Vesicle trafficking 1. (307 aa)    
Predicted Functional Partners:
CHMP1A
Charged multivesicular body protein 1A.
    
 0.998
SNTB2
Syntrophin beta 2.
   
 0.990
ENSPTEP00000010004
annotation not available
   
 0.979
VPS4B
Vacuolar protein sorting 4 homolog B.
   
 0.979
CHMP2A
Charged multivesicular body protein 2A.
    
 0.973
ENSPTEP00000011747
annotation not available
   
 0.964
ENSPTEP00000012697
annotation not available
   
 0.964
LOC113223983
Uncharacterized protein PF14_0397-like.
   
 0.964
LOC113223983-2
Uncharacterized protein PF14_0397-like.
   
 0.964
ENSPTEP00000032333
annotation not available
   
 0.964
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.