STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPTEP00000029760annotation not available (110 aa)    
Predicted Functional Partners:
SF3B1
Splicing factor 3b subunit 1.
   
 0.979
SF3A3
Splicing factor 3a subunit 3.
   
 0.974
SF3B3
Splicing factor 3b subunit 3.
    
 0.972
LOC111530722
Splicing factor 3B subunit 5-like.
   
 0.972
LOC111530722-2
Splicing factor 3B subunit 5-like.
   
 0.972
SF3B5
Splicing factor 3b subunit 5.
   
 0.972
ENSPTEP00000028652
annotation not available
    
 0.972
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.968
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.965
ENSPTEP00000004002
annotation not available
   
  0.959
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.