STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASQ2Calsequestrin 2. (399 aa)    
Predicted Functional Partners:
TRDN
Triadin.
   
 0.966
ASPH
Aspartate beta-hydroxylase.
   
 
 0.934
RYR2
Ryanodine receptor 2.
   
 0.934
RYR1
Ryanodine receptor 1.
   
 0.903
RYR3
Ryanodine receptor 3.
   
 0.883
NIPBL
NIPBL cohesin loading factor.
    
 0.849
CASQ1
Calsequestrin 1.
  
 
 
0.824
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.801
JPH2
Junctophilin 2.
   
 0.786
JPH1
Junctophilin 1.
   
 0.779
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.