Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPTEP00000041813 | MMP19 | ENSPTEP00000041813 | ENSPTEP00000035848 | annotation not available | Matrix metallopeptidase 19. | 0.742 |
ENSPTEP00000041813 | TNC | ENSPTEP00000041813 | ENSPTEP00000038993 | annotation not available | Tenascin C. | 0.795 |
ENSPTEP00000041813 | TNN | ENSPTEP00000041813 | ENSPTEP00000009628 | annotation not available | Tenascin N. | 0.795 |
ENSPTEP00000041813 | TNR | ENSPTEP00000041813 | ENSPTEP00000009099 | annotation not available | Tenascin R. | 0.821 |
FURIN | MMP19 | ENSPTEP00000032304 | ENSPTEP00000035848 | Furin, paired basic amino acid cleaving enzyme. | Matrix metallopeptidase 19. | 0.494 |
MMP19 | ENSPTEP00000041813 | ENSPTEP00000035848 | ENSPTEP00000041813 | Matrix metallopeptidase 19. | annotation not available | 0.742 |
MMP19 | FURIN | ENSPTEP00000035848 | ENSPTEP00000032304 | Matrix metallopeptidase 19. | Furin, paired basic amino acid cleaving enzyme. | 0.494 |
MMP19 | NID1 | ENSPTEP00000035848 | ENSPTEP00000039571 | Matrix metallopeptidase 19. | Nidogen 1. | 0.708 |
MMP19 | NID2 | ENSPTEP00000035848 | ENSPTEP00000042790 | Matrix metallopeptidase 19. | Nidogen 2. | 0.584 |
MMP19 | TIMP1 | ENSPTEP00000035848 | ENSPTEP00000000712 | Matrix metallopeptidase 19. | Metalloproteinase inhibitor 1-like. | 0.711 |
MMP19 | TIMP2 | ENSPTEP00000035848 | ENSPTEP00000036524 | Matrix metallopeptidase 19. | TIMP metallopeptidase inhibitor 2. | 0.885 |
MMP19 | TIMP3 | ENSPTEP00000035848 | ENSPTEP00000022392 | Matrix metallopeptidase 19. | TIMP metallopeptidase inhibitor 3. | 0.814 |
MMP19 | TNC | ENSPTEP00000035848 | ENSPTEP00000038993 | Matrix metallopeptidase 19. | Tenascin C. | 0.742 |
MMP19 | TNN | ENSPTEP00000035848 | ENSPTEP00000009628 | Matrix metallopeptidase 19. | Tenascin N. | 0.742 |
MMP19 | TNR | ENSPTEP00000035848 | ENSPTEP00000009099 | Matrix metallopeptidase 19. | Tenascin R. | 0.742 |
NID1 | MMP19 | ENSPTEP00000039571 | ENSPTEP00000035848 | Nidogen 1. | Matrix metallopeptidase 19. | 0.708 |
NID1 | NID2 | ENSPTEP00000039571 | ENSPTEP00000042790 | Nidogen 1. | Nidogen 2. | 0.544 |
NID2 | MMP19 | ENSPTEP00000042790 | ENSPTEP00000035848 | Nidogen 2. | Matrix metallopeptidase 19. | 0.584 |
NID2 | NID1 | ENSPTEP00000042790 | ENSPTEP00000039571 | Nidogen 2. | Nidogen 1. | 0.544 |
TIMP1 | MMP19 | ENSPTEP00000000712 | ENSPTEP00000035848 | Metalloproteinase inhibitor 1-like. | Matrix metallopeptidase 19. | 0.711 |
page 1 of 2