STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN5Calpain 5. (679 aa)    
Predicted Functional Partners:
CAPNS1
Calpain small subunit 1.
 
 
 0.899
CAST
Calpastatin.
    
 0.814
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.687
CASP9
Caspase 9.
    
 0.612
SRFBP1
Serum response factor binding protein 1.
      
 0.533
PDCD6
Programmed cell death 6.
   
 0.438
ENSPTEP00000025323
annotation not available
   
 0.438
PEF1
penta-EF-hand domain containing 1.
   
 0.438
CCDC189
Coiled-coil domain containing 189.
    
 
 0.438
ENSPTEP00000011328
annotation not available
   
 0.437
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.