STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHF1Pleckstrin homology and FYVE domain containing 1. (279 aa)    
Predicted Functional Partners:
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
     
 0.787
CHMP1A
Charged multivesicular body protein 1A.
     
 0.744
CHMP2A
Charged multivesicular body protein 2A.
     
 0.730
VPS36
Vacuolar protein sorting 36 homolog.
     
 0.728
VPS28
VPS28 subunit of ESCRT-I.
    
 0.722
UEVLD
UEV and lactate/malate dehyrogenase domains.
    
 0.661
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
     
 0.657
MCU
Mitochondrial calcium uniporter.
     
 0.657
TSG101
Tumor susceptibility 101.
    
 0.655
MICU2
Mitochondrial calcium uptake 2.
   
 0.654
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.