STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD9Homeobox D9. (356 aa)    
Predicted Functional Partners:
HOXD10
Homeobox D10.
   
  
0.872
COL2A1
Collagen type II alpha 1 chain.
      
 0.553
HOXD3
Homeobox D3.
   
 
0.526
PBX3
PBX homeobox 3.
    
 
 0.500
PBX1
PBX homeobox 1.
    
 
 0.500
ENSPTEP00000025197
annotation not available
    
 
 0.500
PBX2
PBX homeobox 2.
    
 
 0.500
HOXD4
Homeobox D4.
   
 
0.482
HOXD13
Homeobox D13.
  
  
0.441
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.