STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM238Transmembrane protein 238. (175 aa)    
Predicted Functional Partners:
CATSPER1
Cation channel sperm associated 1.
    
 0.970
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
   
 0.968
CATSPERB
Cation channel sperm associated auxiliary subunit beta.
    
 0.967
CATSPER3
Cation channel sperm associated 3.
    
 0.930
CATSPERZ
Catsper channel auxiliary subunit zeta.
    
 0.914
EFCAB9
EF-hand calcium binding domain 9.
    
 0.910
TMEM262
Transmembrane protein 262.
    
  0.909
TMEM249
Transmembrane protein 249.
    
  0.908
ENSPTEP00000001064
annotation not available
    
 0.905
SYNJ2BP-COX16
SYNJ2BP-COX16 readthrough.
    
 0.905
Your Current Organism:
Piliocolobus tephrosceles
NCBI taxonomy Id: 591936
Other names: P. tephrosceles, Procolobus badius tephrosceles, Procolobus rufomitratus tephrosceles, Ugandan red Colobus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.