Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP46122.1Hypothetical protein; Annotation was generated automatically without manual curation; identified by glimmer; putative. (1123 aa)    
Predicted Functional Partners:
EDP46316.1
Ankyrin repeat protein; Annotation was generated automatically without manual curation.
  
     0.599
EDP46956.1
Putative Rhs family protein; Annotation was generated automatically without manual curation.
       0.594
EDP46294.1
Hypothetical protein; Annotation was generated automatically without manual curation; identified by glimmer; putative.
       0.578
EDP47052.1
Hypothetical protein; Annotation was generated automatically without manual curation; identified by glimmer; putative.
  
     0.576
EDP46133.1
Conserved hypothetical protein; Annotation was generated automatically without manual curation.
  
     0.497
EDP46327.1
Ankyrin 2, neuronal isoform 4; Annotation was generated automatically without manual curation.
  
     0.439
mraW
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
     0.432
EDP46709.1
Catalase hpII (hydroxyperoxidase ii); Serves to protect cells from the toxic effects of hydrogen peroxide.
       0.431
EDP46279.1
Putative transcriptional regulator, PadR family; Annotation was generated automatically without manual curation.
       0.402
Your Current Organism:
Rickettsiella grylli
NCBI taxonomy Id: 59196
Other names: R. grylli
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