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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP45675.1Carboxy--processing protease (C-terminal-processing protease); Annotation was generated automatically without manual curation; Belongs to the peptidase S41A family. (446 aa)    
Predicted Functional Partners:
EDP46898.1
Conserved hypothetical protein; Annotation was generated automatically without manual curation.
   
   0.831
rppH
RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
    
 0.752
EDP46977.1
Protease do; Annotation was generated automatically without manual curation.
    
 0.729
EDP46775.1
Putative gamma-glutamylcysteine synthetase; Annotation was generated automatically without manual curation; identified by similarity to GB:AAB41630.1.
    
  0.625
pheT
phenylalanyl-tRNA synthetase, beta subunit; Annotation was generated automatically without manual curation; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.620
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.537
pepN
Annotation was generated automatically without manual curation.
 
  
 0.529
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
 
  0.518
EDP46804.1
Peptidase, family S24; Annotation was generated automatically without manual curation.
     
 0.492
EDP46634.1
Aspartate aminotransferase A (Transaminase A) (AspAT); Annotation was generated automatically without manual curation.
    
  0.489
Your Current Organism:
Rickettsiella grylli
NCBI taxonomy Id: 59196
Other names: R. grylli
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