STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP46883.1Putative OmpA/MotB domain protein; Annotation was generated automatically without manual curation. (191 aa)    
Predicted Functional Partners:
guaA
Gmp synthase [glutamine-hydrolyzing] (glutamineamidotransferase) (gmp synthetase) (gmps); Catalyzes the synthesis of GMP from XMP.
    
  0.895
EDP45922.1
IcmE protein; Annotation was generated automatically without manual curation.
   
   0.885
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.865
coxB
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
  0.860
EDP46986.1
Outer membrane protein; Annotation was generated automatically without manual curation.
  
 
 0.647
EDP47042.1
Hypothetical protein; Annotation was generated automatically without manual curation; identified by glimmer; putative.
  
  
0.622
rpmF
Ribosomal protein L32; Annotation was generated automatically without manual curation; Belongs to the bacterial ribosomal protein bL32 family.
  
   0.594
rpsF
Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
   
   0.583
lolA
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.580
EDP46043.1
DotC; Annotation was generated automatically without manual curation.
    
   0.574
Your Current Organism:
Rickettsiella grylli
NCBI taxonomy Id: 59196
Other names: R. grylli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.