STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP46822.1IcmD protein; Annotation was generated automatically without manual curation. (140 aa)    
Predicted Functional Partners:
EDP45721.1
IcmJ protein; Annotation was generated automatically without manual curation.
      0.724
EDP46192.1
IcmD protein; Annotation was generated automatically without manual curation.
      
0.664
EDP46161.1
IcmC protein; Annotation was generated automatically without manual curation.
       0.652
EDP46686.1
Hypothetical protein; Annotation was generated automatically without manual curation; identified by glimmer; putative.
       0.652
EDP45922.1
IcmE protein; Annotation was generated automatically without manual curation.
       0.646
EDP46726.1
IcmB protein; Annotation was generated automatically without manual curation.
       0.637
EDP45723.1
IcmL protein; Annotation was generated automatically without manual curation.
     
 0.573
EDP46565.1
IcmK protein; Annotation was generated automatically without manual curation.
       0.572
EDP46318.1
IcmL protein; Annotation was generated automatically without manual curation.
       0.490
EDP45964.1
Hypothetical protein; Annotation was generated automatically without manual curation; identified by glimmer; putative.
       0.460
Your Current Organism:
Rickettsiella grylli
NCBI taxonomy Id: 59196
Other names: R. grylli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.