Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP47001.1Metal ion transporter, nramp family; Annotation was generated automatically without manual curation. (417 aa)    
Predicted Functional Partners:
EDP46367.1
Amino acid permease family protein; Annotation was generated automatically without manual curation.
  
     0.545
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
    
 0.545
EDP46557.1
Oligopeptide transporter, OPT family; Annotation was generated automatically without manual curation.
       0.504
EDP46644.1
ABC Mn2+/Zn2+ transporter, inner membrane subunit; Annotation was generated automatically without manual curation.
   
  
 0.459
EDP45853.1
Cation diffusion facilitator family transporter; Annotation was generated automatically without manual curation.
   
 
 0.430
Your Current Organism:
Rickettsiella grylli
NCBI taxonomy Id: 59196
Other names: R. grylli
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