STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP46475.1Protein AmpG; Annotation was generated automatically without manual curation. (415 aa)    
Predicted Functional Partners:
EDP46461.1
AMP-dependent synthetase and ligase; Annotation was generated automatically without manual curation.
   
 
 0.863
EDP46005.1
Outer membrane lipoprotein; Annotation was generated automatically without manual curation.
       0.603
EDP47004.1
Beta-hexosaminidase (N-acetyl-beta-glucosaminidase)(Beta-N- acetylhexosaminidase); Annotation was generated automatically without manual curation.
 
   
 0.566
anmK
anhydro-N-acetylmuramic acid kinase (AnhMurNAc kinase); Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
  
   
 0.465
groS
Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
       0.435
msrA
Peptide methionine sulfoxide reductase MsrB/msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
      
 0.418
Your Current Organism:
Rickettsiella grylli
NCBI taxonomy Id: 59196
Other names: R. grylli
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.