STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDP46809.1Annotation was generated automatically without manual curation. (314 aa)    
Predicted Functional Partners:
EDP46168.1
Polysaccharide deacetylase; Annotation was generated automatically without manual curation.
 
 
 0.995
EDP46365.1
Dolichyl-phosphate-mannose-protein mannosyltransferase family protein; Annotation was generated automatically without manual curation.
 
 
 0.984
EDP46610.1
Bifunctional polymyxin resistance protein ArnA (Polymyxin resistanceprotein pmrI); Annotation was generated automatically without manual curation.
 
  0.941
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
 
  0.911
EDP46097.1
Hypothetical protein; Annotation was generated automatically without manual curation; identified by glimmer; putative.
       0.545
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
     
 0.487
EDP46732.1
Conserved hypothetical protein; Annotation was generated automatically without manual curation.
 
 
  0.476
EDP46123.1
UDP-glucose 6-dehydrogenase; Annotation was generated automatically without manual curation.
  
  
 0.466
EDP46859.1
Enhancing lycopene biosynthesis protein 2; Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate; Belongs to the peptidase C56 family.
       0.455
EDP46533.1
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Annotation was generated automatically without manual curation; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.436
Your Current Organism:
Rickettsiella grylli
NCBI taxonomy Id: 59196
Other names: R. grylli
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