STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP45667.1DNA-dependant ATPase; Annotation was generated automatically without manual curation. (434 aa)    
Predicted Functional Partners:
EDP45715.1
DNA translocase FtsK; Annotation was generated automatically without manual curation.
    0.765
EDP46048.1
Stringent starvation protein A; Annotation was generated automatically without manual curation.
 
     0.645
sspB
Stringent starvation protein B; Annotation was generated automatically without manual curation.
  
    0.605
EDP46885.1
S6 modification enzyme RimK; Annotation was generated automatically without manual curation.
       0.598
rimK
Glutathione synthase/Ribosomal protein S6 modification enzyme; Annotation was generated automatically without manual curation; Belongs to the RimK family.
       0.598
nadE
Glutamine-dependent NAD(+) synthetase (NAD(+) synthase[glutamine-hydrolyzing]); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
    0.564
polI
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.552
dnaN
DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
    
 
 0.534
guaA
Gmp synthase [glutamine-hydrolyzing] (glutamineamidotransferase) (gmp synthetase) (gmps); Catalyzes the synthesis of GMP from XMP.
     
 0.520
petC
ubiquinol--Cytochrome c reductase, cytochrome c1 subunit; Annotation was generated automatically without manual curation.
     
 0.487
Your Current Organism:
Rickettsiella grylli
NCBI taxonomy Id: 59196
Other names: R. grylli
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