STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpDV-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (207 aa)    
Predicted Functional Partners:
atpB
ATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
 0.999
atpA
ATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
ESK66552.1
ATP synthase, subunit F; KEGG: spi:MGAS10750_Spy0135 1.5e-27 ntpF; V-type sodium ATP synthase subunit F K02122.
 
 0.999
ESK66553.1
ATP synthase, subunit C; KEGG: spn:SP_1319 9.5e-56 v-type sodium ATP synthase, subunit C K02119.
 
 0.999
ESK66554.1
Hypothetical protein; KEGG: spn:SP_1320 3.0e-29 v-type sodium ATP synthase, subunit E K02121; Psort location: Cytoplasmic, score: 8.96.
  
 0.999
ESK66556.1
KEGG: spm:spyM18_0144 4.8e-132 V-type Na+ -ATPase subunit I K02123; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
ESK66555.1
KEGG: spn:SP_1321 1.6e-55 v-type sodium ATP synthase, subunit K K02124; Psort location: CytoplasmicMembrane, score: 9.46.
 
 0.998
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.976
ESK64871.1
Hypothetical protein.
   
  0.791
ESK65027.1
Hypothetical protein; KEGG: fnu:FN0099 1.6e-21 inorganic pyrophosphatase K01507; Psort location: Cytoplasmic, score: 8.96.
   
 
  0.765
Your Current Organism:
Abiotrophia defectiva
NCBI taxonomy Id: 592010
Other names: A. defectiva ATCC 49176, Abiotrophia defectiva ATCC 49176, Abiotrophia defectiva str. ATCC 49176, Abiotrophia defectiva strain ATCC 49176
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