STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GlnAKEGG: efa:EF2159 7.9e-171 glnA; glutamine synthetase, type I K01915; Psort location: Cytoplasmic, score: 9.26. (448 aa)    
Predicted Functional Partners:
GlmS
Glutamine-fructose-6-phosphate transaminase; KEGG: gka:GK0155 4.7e-189 D-fructose-6-phosphate amidotransferase K00820.
 
 
 0.956
ESK65847.1
Putative HTH-type transcriptional regulator GlnR; KEGG: ana:alr3162 1.2e-06 transcriptional regulator, MerR family / precorrin-8X methylmutase K01833; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.936
carA
KEGG: fnu:FN0421 3.8e-139 carbamoyl-phosphate synthase small chain K01956; Psort location: Cytoplasmic, score: 8.96; Belongs to the CarA family.
  
 
 0.935
carB
KEGG: fnu:FN0422 0. carbamoyl-phosphate synthase large chain K01955; Belongs to the CarB family.
  
 
 0.934
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.926
LpdA
KEGG: efa:EF1356 8.5e-174 lpdA; pyruvate dehydrogenase complex E3 component, dihydrolipoamide dehydrogenase K00382; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.838
ESK66480.1
KEGG: bca:BCE_5130 1.1e-08 gcvH; glycine cleavage system protein H K00281.
   
 
 0.825
ESK65844.1
TipAS antibiotic-recognition domain protein; KEGG: vfi:VFA0114 6.4e-09 methyltransferase K00599.
 
 
 0.793
ESK65979.1
Hypothetical protein; KEGG: eci:UTI89_C3737 0.0014 yhdM; Zn(II)-responsive regulator of ZntA; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.734
ESK65428.1
Putative maltodextrin-binding protein MdxE; Psort location: Periplasmic, score: 9.44.
    
 
 0.731
Your Current Organism:
Abiotrophia defectiva
NCBI taxonomy Id: 592010
Other names: A. defectiva ATCC 49176, Abiotrophia defectiva ATCC 49176, Abiotrophia defectiva str. ATCC 49176, Abiotrophia defectiva strain ATCC 49176
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