STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESK65653.1ABC transporter, substrate-binding protein, family 5; KEGG: shn:Shewana3_2650 2.5e-11 acetate kinase K00925; Psort location: Periplasmic, score: 9.99. (545 aa)    
Predicted Functional Partners:
ESK66361.1
Putative oligopeptide transport system permease protein OppB; KEGG: rha:RHA1_ro09047 8.0e-36 ABC peptide transporter, permease component K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.974
ESK65737.1
Putative oligopeptide transport system permease protein OppB; KEGG: rha:RHA1_ro09047 1.8e-36 ABC peptide transporter, permease component K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.971
ESK66360.1
Oligopeptide ABC transporter, permease protein OppC family protein; KEGG: baa:BA_0884 0.0014 binding-protein-dependent transport systems inner membrane component K00294; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.968
ESK65736.1
KEGG: lwe:lwe1444 1.9e-08 opuCB; glycine betaine/L-proline ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.957
ESK66359.1
Oligopeptide transport ATP-binding protein OppD; KEGG: mmo:MMOB4490 1.7e-79 pgk, oppD; bidomainal protein K00927; Psort location: CytoplasmicMembrane, score: 8.02; Belongs to the ABC transporter superfamily.
 
 0.934
ESK65738.1
Putative oligopeptide-binding protein OppA; KEGG: shn:Shewana3_2650 3.5e-29 acetate kinase K00925; Psort location: Periplasmic, score: 9.44.
 
 
0.933
ESK65735.1
KEGG: cch:Cag_1883 1.0e-83 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031; Psort location: CytoplasmicMembrane, score: 8.02.
 
 0.914
ESK65734.1
Oligopeptide ABC transporter, ATP-binding protein OppF; KEGG: reh:H16_B1124 1.8e-70 ABC-type transporter; Psort location: Cytoplasmic, score: 9.12.
 
 0.912
ESK66358.1
Oligopeptide ABC transporter, ATP-binding protein OppF; KEGG: reh:H16_B0716 6.3e-75 dppF3; ABC-type transporter, ATPase component: PepT family; Belongs to the ABC transporter superfamily.
 
 0.904
ESK66416.1
ABC transporter, substrate-binding protein, family 5; KEGG: shn:Shewana3_2650 1.5e-11 acetate kinase K00925.
  
  
 
0.901
Your Current Organism:
Abiotrophia defectiva
NCBI taxonomy Id: 592010
Other names: A. defectiva ATCC 49176, Abiotrophia defectiva ATCC 49176, Abiotrophia defectiva str. ATCC 49176, Abiotrophia defectiva strain ATCC 49176
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