STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESK65086.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
ESK65087.1
Efflux ABC transporter, permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.757
ESK65088.1
Putative bacteriocin export ABC transporter; KEGG: lwe:lwe2133 8.7e-62 ABC transporter, ATP-binding protein K06020; Psort location: CytoplasmicMembrane, score: 9.82.
       0.757
ESK65089.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: spd:SPD_1445 3.8e-61 sensor histidine kinase.
       0.489
ESK65090.1
KEGG: eci:UTI89_C2354 2.3e-29 baeR; transcriptional response regulatory protein BaeR K07664; Psort location: Cytoplasmic, score: 9.97.
       0.489
Your Current Organism:
Abiotrophia defectiva
NCBI taxonomy Id: 592010
Other names: A. defectiva ATCC 49176, Abiotrophia defectiva ATCC 49176, Abiotrophia defectiva str. ATCC 49176, Abiotrophia defectiva strain ATCC 49176
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