STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESK65224.1KEGG: lsa:LSA0862 1.9e-59 N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase) (autolysin) K01448. (458 aa)    
Predicted Functional Partners:
ESK66370.1
KEGG: spd:SPD_1920 6.3e-27 peptidase, S54 (rhomboid) family protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
   0.768
ESK64691.1
NlpC/P60 family protein; KEGG: eci:UTI89_C0735 1.1e-13 tolA; membrane spanning protein TolA K03646.
 
  
 0.657
hisS
histidine--tRNA ligase; KEGG: efa:EF1971 5.8e-136 hisS; histidyl-tRNA synthetase K01892; Psort location: Cytoplasmic, score: 10.00.
 
    0.652
ESK65473.1
NlpC/P60 family protein; KEGG: lsa:LSA1437 8.1e-21 N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase) (autolysin) K01446; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.609
ESK66566.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: bcz:BCZK2246 1.9e-130 pbp2; penicillin-binding protein 2 K05364; Psort location: CytoplasmicMembrane, score: 8.02.
 
  
 0.574
aspS
aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
  
    0.562
ESK66493.1
Hypothetical protein.
  
     0.546
ESK64876.1
Hypothetical protein; KEGG: gme:Gmet_0780 0.0012 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor K03412:K00575.
  
  
 0.546
ESK66598.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: bba:Bd3213 5.8e-49 cell division protein K03587; Psort location: CytoplasmicMembrane, score: 8.02.
 
  
 0.545
ESK66509.1
Transglycosylase; KEGG: spk:MGAS9429_Spy0082 1.2e-126 pbp1b; multimodular transpeptidase-transglycosylase PBP 1B K05364.
 
 
 
 0.543
Your Current Organism:
Abiotrophia defectiva
NCBI taxonomy Id: 592010
Other names: A. defectiva ATCC 49176, Abiotrophia defectiva ATCC 49176, Abiotrophia defectiva str. ATCC 49176, Abiotrophia defectiva strain ATCC 49176
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