STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESK64983.1Hypothetical protein; KEGG: sme:SMc04005 0.0045 pykA; pyruvate kinase K00873. (299 aa)    
Predicted Functional Partners:
ESK64982.1
KEGG: cpf:CPF_1070 3.4e-147 PTS system, N-acetylglucosamine-specific IIBC component K02803:K02804; Psort location: CytoplasmicMembrane, score: 10.00.
       0.718
ESK65979.1
Hypothetical protein; KEGG: eci:UTI89_C3737 0.0014 yhdM; Zn(II)-responsive regulator of ZntA; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.483
TsaB
Universal bacterial protein YeaZ; KEGG: btl:BALH_0244 1.8e-22 gcp; O-sialoglycoprotein endopeptidase K01409.
  
    0.470
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.451
RimI-2
KEGG: tel:tll0471 3.2e-16 probable acetyltransferase K03789; Psort location: Cytoplasmic, score: 8.96.
       0.448
RimI
KEGG: efa:EF2473 1.5e-18 ribosomal-protein-alanine acetyltransferase, putative K03789; Psort location: Cytoplasmic, score: 9.97.
       0.442
rplT
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
    0.438
ESK64826.1
Cof-like hydrolase; KEGG: spa:M6_Spy1109 1.4e-45 O-methyltransferase K00599; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.437
ESK64984.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0453 1.0e-97 ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.415
ESK64985.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_1327 1.7e-74 ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.415
Your Current Organism:
Abiotrophia defectiva
NCBI taxonomy Id: 592010
Other names: A. defectiva ATCC 49176, Abiotrophia defectiva ATCC 49176, Abiotrophia defectiva str. ATCC 49176, Abiotrophia defectiva strain ATCC 49176
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