STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35525.1Transporter, MotA/TolQ/ExbB proton channel family protein; KEGG: apb:SAR116_2296 2.2e-14 biopolymer transport protein K03562; Psort location: CytoplasmicMembrane, score: 10.00. (209 aa)    
Predicted Functional Partners:
KRT35523.1
Transport energizing protein, ExbD/TolR family; KEGG: apb:SAR116_2297 2.1e-09 TolR protein K03559.
 
 
 0.999
KRT35522.1
TonB-dependent receptor; KEGG: tva:TVAG_015160 0.00015 exodeoxyribonuclease III family protein; K01142 exodeoxyribonuclease III.
 
 
 0.997
KRT35524.1
Periplasmic binding protein; KEGG: bao:BAMF_3696 0.00014 RBAM_035840; iron compound ABC transporter, substrate-binding protein FeuA.
 
  
 0.872
KRT35754.1
KEGG: aco:Amico_0576 3.3e-82 ABC transporter related protein; K06861 lipopolysaccharide export system ATP-binding protein; Psort location: Cytoplasmic, score: 9.12.
 
   
 0.788
KRT35655.1
Permease, YjgP/YjgQ family; KEGG: hip:CGSHiEE_03515 1.3e-13 leucyl aminopeptidase K11720; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.746
KRT34878.1
Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 4.1e-11 fadD; long-chain-fatty-acid--CoA ligase K12340; Psort location: OuterMembrane, score: 9.92.
  
   
 0.739
KRT35648.1
Outer membrane protein, OMP85 family; KEGG: cre:CHLREDRAFT_195498 2.1e-20 OEP80; chloroplast outer envelope protein K07277; Psort location: OuterMembrane, score: 9.96.
  
   
 0.737
KRT35216.1
Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 9.1e-05 fadD; long-chain-fatty-acid--CoA ligase K12340; Psort location: OuterMembrane, score: 9.96.
  
   
 0.727
KRT34308.1
KEGG: vap:Vapar_4267 0.00024 RND efflux system, outer membrane lipoprotein, NodT family K00694; Psort location: OuterMembrane, score: 9.93.
  
   
 0.723
KRT35653.1
acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
  
 0.699
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.