STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34458.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (453 aa)    
Predicted Functional Partners:
KRT34585.1
Hypothetical protein.
     0.977
KRT34460.1
Hypothetical protein.
     0.954
KRT34459.1
MmgE/PrpD family protein; KEGG: sen:SACE_5045 3.1e-54 prpD2; 2-methylcitrate dehydratase; Psort location: Cytoplasmic, score: 9.97.
 
    0.851
KRT34461.1
MmgE/PrpD family protein; KEGG: sen:SACE_5045 6.3e-56 prpD2; 2-methylcitrate dehydratase; Psort location: Cytoplasmic, score: 9.97.
 
    0.843
KRT35246.1
methylmalonyl-CoA carboxyltransferase 12S subunit; KEGG: tai:Taci_0291 6.1e-232 carboxyl transferase; K01966 propionyl-CoA carboxylase beta chain; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.803
KRT34462.1
MmgE/PrpD family protein; KEGG: pic:PICST_43263 4.1e-45 YXE1; hypothetical protein; K01720 2-methylcitrate dehydratase; Psort location: Cytoplasmic, score: 9.97.
 
    0.776
KRT34923.1
KEGG: tai:Taci_1436 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
    
  0.733
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
 
 0.454
KRT35248.1
KEGG: tai:Taci_0289 3.1e-54 cobalamin B12-binding domain protein; K01849 methylmalonyl-CoA mutase, C-terminal domain; Psort location: Cytoplasmic, score: 8.96.
    
 0.452
KRT35249.1
KEGG: tai:Taci_0288 5.4e-240 methylmalonyl-CoA mutase, large subunit K01848; Psort location: Cytoplasmic, score: 8.96.
    
 0.451
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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