STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35753.1OstA-like protein; Psort location: Cytoplasmic, score: 8.96. (284 aa)    
Predicted Functional Partners:
KRT35754.1
KEGG: aco:Amico_0576 3.3e-82 ABC transporter related protein; K06861 lipopolysaccharide export system ATP-binding protein; Psort location: Cytoplasmic, score: 9.12.
  
  
 0.974
KRT34661.1
OstA-like protein.
  
 
 0.944
KRT35601.1
KEGG: apb:SAR116_0851 3.7e-12 flagellar basal-body rod protein FlgC K02388.
    
   0.914
KRT35618.1
Flagellar motor switch protein FliM; KEGG: apb:SAR116_0825 3.5e-18 surface presentation of antigens (SpoA) protein K02416; Psort location: CytoplasmicMembrane, score: 7.88.
    
   0.724
KRT35749.1
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
       0.724
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
       0.724
KRT35751.1
KEGG: tai:Taci_1239 1.4e-113 aspartate kinase K00928; Psort location: Cytoplasmic, score: 8.96; Belongs to the aspartokinase family.
       0.714
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.712
KRT35748.1
Hypothetical protein.
       0.697
KRT35648.1
Outer membrane protein, OMP85 family; KEGG: cre:CHLREDRAFT_195498 2.1e-20 OEP80; chloroplast outer envelope protein K07277; Psort location: OuterMembrane, score: 9.96.
   
  
 0.511
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.