STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35852.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (109 aa)    
Predicted Functional Partners:
flgI
Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.808
KRT35853.1
Hypothetical protein.
       0.785
KRT35849.1
Flagella basal body P-ring formation protein FlgA; KEGG: apb:SAR116_0858 9.4e-07 SAF domain protein K02386; Psort location: Cytoplasmic, score: 8.96.
       0.702
KRT35850.1
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.702
KRT35848.1
KEGG: apb:SAR116_0847 1.5e-61 flagellar basal-body rod protein FlgG K02392; Psort location: Extracellular, score: 9.45.
       0.700
KRT35847.1
KEGG: apb:SAR116_0847 7.9e-26 flagellar basal-body rod protein FlgG K02392; Psort location: Extracellular, score: 9.71.
       0.625
KRT35846.1
KEGG: apb:SAR116_0710 7.2e-87 cell shape determining protein MreB/Mrl K03569; Psort location: Cytoplasmic, score: 9.97.
       0.515
KRT35854.1
KEGG: tai:Taci_1141 1.6e-176 L-lysine 6-transaminase; K03918 L-lysine 6-transaminase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.505
KRT35841.1
Ribosomal protein L17; KEGG: apb:SAR116_2416 1.3e-23 ribosomal protein L17 K02879; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL17 family.
       0.460
KRT35842.1
ABC transporter, ATP-binding protein; KEGG: cbt:CLH_0268 1.6e-50 cobalt transporter ATP-binding subunit K02006; Psort location: CytoplasmicMembrane, score: 10.00.
       0.460
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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