STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35882.1Amidohydrolase family protein; KEGG: amt:Amet_2067 2.7e-80 N-acyl-D-amino-acid deacylase; Psort location: Cytoplasmic, score: 9.97. (442 aa)    
Predicted Functional Partners:
KRT35881.1
Putative cystathionine beta-lyase PatB; KEGG: aco:Amico_0119 4.1e-100 aminotransferase class I and II; K14155 cystathione beta-lyase; Psort location: Cytoplasmic, score: 9.97.
       0.693
KRT35880.1
HEPN domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.476
KRT35879.1
Transporter, small conductance mechanosensitive ion channel MscS family protein; KEGG: mla:Mlab_1701 3.0e-17 phosphoglycerate mutase K01834; Psort location: CytoplasmicMembrane, score: 10.00.
       0.468
KRT35350.1
Amidohydrolase; KEGG: fnu:FN1186 2.6e-75 amidohydrolase K01463; Psort location: Cytoplasmic, score: 8.96; Belongs to the peptidase M20A family.
 
     0.444
KRT35224.1
Peptidase; KEGG: cbl:CLK_2276 5.9e-53 peptidase; Psort location: Cytoplasmic, score: 9.97.
 
    0.434
speH
S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.
       0.426
KRT34530.1
Putative selenium metabolism hydrolase; KEGG: kcr:Kcr_0280 5.0e-47 succinyl-diaminopimelate desuccinylase; Psort location: Cytoplasmic, score: 9.97.
 
    0.411
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.