STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34499.1Hypothetical protein; KEGG: apb:SAR116_2179 1.4e-09 predicted permease K07090; Psort location: CytoplasmicMembrane, score: 10.00. (264 aa)    
Predicted Functional Partners:
KRT34500.1
Hypothetical protein.
       0.576
KRT34498.1
Hypothetical protein.
       0.453
pheT
KEGG: aco:Amico_0710 1.4e-202 phenylalanyl-tRNA synthetase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
     
 0.416
KRT34501.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.414
KRT34780.1
Putative serine protease MucD; KEGG: aco:Amico_0697 1.7e-140 protease Do.
    
 
 0.401
KRT35110.1
Hypothetical protein; KEGG: ppg:PputGB1_4377 3.9e-13 protease Do; Psort location: Periplasmic, score: 9.44.
    
 
 0.401
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.