STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35964.1SpoIVB peptidase S55; KEGG: tra:Trad_0316 6.1e-44 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase. (585 aa)    
Predicted Functional Partners:
KRT35967.1
Virulence factor Mce family protein; KEGG: bba:Bd3413 0.00072 ABC transporter substrate binding protein K02067; Psort location: OuterMembrane, score: 9.49.
 
     0.848
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.824
KRT34665.1
Hypothetical protein.
  
     0.774
KRT35912.1
Outer membrane protein.
  
     0.773
KRT35855.1
Hypothetical protein; KEGG: edi:EDI_048910 2.0e-08 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96.
  
     0.772
KRT35648.1
Outer membrane protein, OMP85 family; KEGG: cre:CHLREDRAFT_195498 2.1e-20 OEP80; chloroplast outer envelope protein K07277; Psort location: OuterMembrane, score: 9.96.
  
     0.766
KRT35905.1
Hypothetical protein; KEGG: lsp:Bsph_1990 5.2e-07 5'-nucleotidase precursor K01081; Psort location: OuterMembrane, score: 9.95.
  
     0.762
KRT35965.1
Hypothetical protein; KEGG: apb:SAR116_0647 4.8e-42 ABC-type transport system involved in resistance to organic solvents K02066; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MlaE permease family.
 
     0.745
KRT35538.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.739
KRT35966.1
Putative toluene tolerance protein Ttg2A; KEGG: saf:SULAZ_1668 5.4e-50 methionine import ATP-binding protein MetN K02065; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.739
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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