STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35978.1TRAP transporter solute receptor, TAXI family; KEGG: cco:CCC13826_0649 1.3e-39 DNA primase K07080. (320 aa)    
Predicted Functional Partners:
KRT36257.1
TRAP transporter, 4TM/12TM fusion protein; KEGG: cco:CCC13826_0648 1.3e-112 N-carbamoyl-L-amino acid hydrolase (L-carbamoylase); Psort location: CytoplasmicMembrane, score: 10.00.
    0.882
KRT34771.1
Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.
 
    0.880
KRT35235.1
TRAP transporter, 4TM/12TM fusion protein; KEGG: cco:CCC13826_0648 2.4e-104 N-carbamoyl-L-amino acid hydrolase (L-carbamoylase); Psort location: CytoplasmicMembrane, score: 10.00.
    0.875
KRT34797.1
TRAP transporter, 4TM/12TM fusion protein; KEGG: cco:CCC13826_0648 1.0e-94 N-carbamoyl-L-amino acid hydrolase (L-carbamoylase); Psort location: CytoplasmicMembrane, score: 10.00.
    0.865
KRT34454.1
TRAP transporter, 4TM/12TM fusion protein; KEGG: cco:CCC13826_0648 4.2e-66 N-carbamoyl-L-amino acid hydrolase (L-carbamoylase); Psort location: CytoplasmicMembrane, score: 10.00.
    0.830
KRT35979.1
HutP; Psort location: Cytoplasmic, score: 8.96.
       0.542
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
       0.414
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.