STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT36020.1Putative dGTPase; KEGG: tai:Taci_1057 5.7e-87 deoxyguanosinetriphosphate triphosphohydrolase; K01129 dGTPase; Psort location: Cytoplasmic, score: 8.96; Belongs to the dGTPase family. Type 2 subfamily. (298 aa)    
Predicted Functional Partners:
surE
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.853
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.848
KRT36148.1
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
  0.834
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
    
 0.584
KRT36019.1
Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.
       0.524
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
     
 0.516
glyS
KEGG: aco:Amico_0760 1.3e-199 glycyl-tRNA synthetase, beta subunit K01879; Psort location: Cytoplasmic, score: 9.97.
  
    0.508
rny
YmdA/YtgF family protein; Endoribonuclease that initiates mRNA decay.
    
  0.504
glyQ
KEGG: tai:Taci_1062 1.4e-138 glycyl-tRNA synthetase, alpha subunit K01878; Psort location: Cytoplasmic, score: 9.97.
  
    0.485
KRT35252.1
HAD hydrolase, family IA, variant 3; KEGG: tad:TRIADDRAFT_64238 3.3e-13 expressed hypothetical protein; K08726 soluble epoxide hydrolase; Psort location: Cytoplasmic, score: 8.96.
    
  0.478
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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