STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34511.1Cytidine and deoxycytidylate deaminase zinc-binding region; KEGG: bme:BMEII0619 1.2e-43 deoxycytidylate deaminase; Psort location: Cytoplasmic, score: 8.96. (193 aa)    
Predicted Functional Partners:
KRT34512.1
Putative xanthine dehydrogenase, small subunit; KEGG: tai:Taci_0433 9.3e-110 molybdopterin dehydrogenase FAD-binding protein; K03518 carbon-monoxide dehydrogenase small subunit; Psort location: Cytoplasmic, score: 9.97.
 
  
  0.885
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.867
KRT35122.1
Exodeoxyribonuclease III; KEGG: aco:Amico_1607 3.1e-79 exodeoxyribonuclease III; K01142 exodeoxyribonuclease III; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.867
hisI
KEGG: aco:Amico_0677 6.9e-66 phosphoribosyl-ATP diphosphatase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase; Psort location: Cytoplasmic, score: 9.97; In the N-terminal section; belongs to the PRA-CH family.
   
  
 0.851
KRT35962.1
KEGG: tai:Taci_0812 5.6e-32 biotin/acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase; Psort location: Cytoplasmic, score: 9.97.
  
    0.841
KRT34513.1
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein; KEGG: scl:sce5895 1.4e-168 putative xanthine dehydrogenase; Psort location: CytoplasmicMembrane, score: 7.88.
 
  
  0.837
KRT34525.1
4Fe-4S binding domain protein; KEGG: tme:Tmel_0121 2.6e-75 dihydroorotate dehydrogenase family protein; K00226 dihydroorotate oxidase; Psort location: Cytoplasmic, score: 9.97.
    
  0.736
KRT34518.1
Putative protein SsnA; KEGG: ssm:Spirs_1387 5.5e-73 selenium metabolism protein SsnA; Psort location: Cytoplasmic, score: 9.97.
    
 0.726
KRT36207.1
Putative aldehyde dehydrogenase; KEGG: dat:HRM2_38770 2.2e-275 mop2; Mop2; Psort location: Cytoplasmic, score: 9.97.
    
 0.714
KRT36392.1
KEGG: dvu:DVU1559 0. mop; aldehyde oxidoreductase K07469; Psort location: Cytoplasmic, score: 9.97.
    
 0.714
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.