STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT36090.1Hypothetical protein; KEGG: edi:EDI_341030 0.00031 intracellular protein transport protein USO1; Psort location: Cytoplasmic, score: 8.96. (104 aa)    
Predicted Functional Partners:
pheT
KEGG: aco:Amico_0710 1.4e-202 phenylalanyl-tRNA synthetase, beta subunit K01890; Psort location: Cytoplasmic, score: 9.97.
       0.805
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.797
KRT36092.1
CvpA family protein; KEGG: krh:KRH_04540 1.2e-05 S1C family peptidase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.785
KRT36091.1
Hypothetical protein.
       0.773
pheS
KEGG: aco:Amico_0709 3.5e-126 phenylalanyl-tRNA synthetase, alpha subunit K01889; Psort location: Cytoplasmic, score: 10.00.
       0.770
KRT36087.1
Putative Ktr system potassium uptake protein A; KEGG: rha:RHA1_ro01633 0.0028 Zn-dependent alcohol dehydrogenase K00004; Psort location: Cytoplasmic, score: 8.96.
       0.672
KRT36086.1
Potassium uptake protein, TrkH family; KEGG: aco:Amico_0707 1.8e-113 H(+)-transporting two-sector ATPase K03498; Psort location: CytoplasmicMembrane, score: 10.00.
       0.637
rplT
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
       0.548
rpmI
Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
       0.461
infC
Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
       0.410
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.