STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT36113.1KEGG: tai:Taci_0941 5.0e-56 glycosyl transferase family 4; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase; Psort location: CytoplasmicMembrane, score: 10.00. (295 aa)    
Predicted Functional Partners:
KRT36114.1
KEGG: aco:Amico_0880 6.9e-98 UDP-N-acetylglucosamine 2-epimerase K01791; Psort location: Cytoplasmic, score: 9.97.
 
 0.962
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
  
 0.894
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
  
 0.858
murD
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
  
 0.817
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
  
 0.814
KRT36111.1
KEGG: tai:Taci_0943 7.2e-103 LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase; Psort location: CytoplasmicMembrane, score: 7.88.
     
 0.796
KRT35908.1
Hypothetical protein; KEGG: cti:RALTA_B1244 1.5e-25 putative aspartate/glutamate/hydantoin racemase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.790
KRT36160.1
KEGG: aco:Amico_0994 3.2e-109 glycosyl transferase, WecB/TagA/CpsF family K05946; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the glycosyltransferase 26 family.
 
 
 
 0.789
KRT36119.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.734
KRT36284.1
Glycosyltransferase family 28 protein; KEGG: aco:Amico_0819 1.6e-64 undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase K02563; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.733
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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