STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT36122.1RIP metalloprotease RseP; KEGG: mta:Moth_1042 2.6e-57 peptidase RseP; K01417; Psort location: CytoplasmicMembrane, score: 10.00. (345 aa)    
Predicted Functional Partners:
KRT36119.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
  
 0.972
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
  
 0.961
KRT36120.1
KEGG: aco:Amico_0874 1.9e-72 phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the CDS family.
  
    0.954
KRT35648.1
Outer membrane protein, OMP85 family; KEGG: cre:CHLREDRAFT_195498 2.1e-20 OEP80; chloroplast outer envelope protein K07277; Psort location: OuterMembrane, score: 9.96.
  
  
 0.854
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
 
     0.851
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
     0.844
KRT36117.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.826
KRT36118.1
uracil-DNA glycosylase A; KEGG: tai:Taci_0936 2.4e-63 phage SPO1 DNA polymerase-related protein; K02334 DNA polymerase bacteriophage-type; Psort location: Cytoplasmic, score: 8.96.
       0.824
hisC
KEGG: tai:Taci_0938 3.7e-106 histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
 0.814
KRT35586.1
KEGG: aco:Amico_1536 3.3e-66 signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the peptidase S26 family.
 
  
 0.705
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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