STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34521.1NCS1 nucleoside transporter family protein; Psort location: CytoplasmicMembrane, score: 10.00. (417 aa)    
Predicted Functional Partners:
pyrB
KEGG: aco:Amico_1601 1.9e-104 aspartate carbamoyltransferase K00609; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
   
    0.767
KRT34959.1
Amidohydrolase family protein; KEGG: bja:bll7276 1.6e-112 putative cytosine deaminase K01485; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.757
KRT34520.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.757
KRT34518.1
Putative protein SsnA; KEGG: ssm:Spirs_1387 5.5e-73 selenium metabolism protein SsnA; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.703
KRT35872.1
ATP-grasp domain protein; KEGG: dau:Daud_1774 2.7e-112 hypothetical protein; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 8.96.
   
    0.678
KRT36433.1
KEGG: bts:Btus_2201 3.0e-255 carbamoyl-phosphate synthase, large subunit; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarB family.
   
    0.678
KRT34514.1
Putative permease; KEGG: apb:SAR116_1372 4.3e-34 xanthine/uracil permease, putative K03458; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.653
KRT34519.1
Cytidine and deoxycytidylate deaminase zinc-binding region; KEGG: reh:H16_A2722 2.1e-32 cytosine/adenosine deaminase; Psort location: Cytoplasmic, score: 9.97.
       0.626
thiM
Putative hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
  
    0.551
KRT34515.1
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein; KEGG: amt:Amet_0607 5.6e-167 xanthine dehydrogenase; Psort location: CytoplasmicMembrane, score: 7.88.
       0.538
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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