STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpAATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (555 aa)    
Predicted Functional Partners:
KRT36163.1
KEGG: aco:Amico_0991 1.9e-141 V-type ATPase 116 kDa subunit; K02123 V-type H+-transporting ATPase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.999
atpB
V-type sodium ATPase, B subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
0.999
KRT36170.1
KEGG: tth:TTC0905 2.7e-16 V-type sodium ATP synthase subunit D K02120; Psort location: Cytoplasmic, score: 8.96.
 
 0.999
KRT36164.1
ATP synthase subunit C; KEGG: aco:Amico_0990 3.1e-24 H+transporting two-sector ATPase C subunit; K02124 V-type H+-transporting ATPase subunit K; Psort location: CytoplasmicMembrane, score: 9.86.
 
 0.998
KRT36165.1
Hypothetical protein; KEGG: nmr:Nmar_1692 3.4e-07 H+transporting two-sector ATPase E subunit; K02121 V-type H+-transporting ATPase subunit E; Psort location: Cytoplasmic, score: 8.96.
  
 0.998
KRT36166.1
Hypothetical protein; KEGG: aco:Amico_0988 9.0e-57 H+-ATPase subunit C-like protein; K02119 V-type H+-transporting ATPase subunit C; Psort location: Cytoplasmic, score: 8.96.
  
 0.998
KRT36266.1
KEGG: aco:Amico_0802 2.2e-147 V-type ATPase 116 kDa subunit; K02123 V-type H+-transporting ATPase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.998
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.998
KRT35135.1
KEGG: tai:Taci_0521 5.6e-167 V-type ATPase 116 kDa subunit; K02123 V-type H+-transporting ATPase subunit I; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.998
atpD-2
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.998
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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