STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mnmAtRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (351 aa)    
Predicted Functional Partners:
KRT36183.1
KEGG: tte:TTE1771 7.0e-192 lonB; ATP-dependent protease; K04076 Lon-like ATP-dependent protease; Psort location: Cytoplasmic, score: 9.97.
       0.822
KRT36184.1
Base excision DNA repair protein, HhH-GPD family; KEGG: aco:Amico_1041 2.7e-55 DNA-(apurinic or apyrimidinic site) lyase K10773; Psort location: Cytoplasmic, score: 9.26.
       0.822
KRT36185.1
4Fe-4S binding domain protein; KEGG: mmg:MTBMA_c01390 1.1e-06 fwdH; tungsten formylmethanofuran dehydrogenase, subunit H K00204; Psort location: Cytoplasmic, score: 8.96.
     
 0.788
KRT36181.1
KEGG: aco:Amico_1044 1.9e-262 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537; Psort location: CytoplasmicMembrane, score: 10.00.
       0.777
KRT36180.1
cob(I)yrinic acid a,c-diamide adenosyltransferase; KEGG: tai:Taci_0126 3.3e-50 cob(I)alamin adenosyltransferase K00798; Psort location: Cytoplasmic, score: 9.97.
       0.757
KRT34550.1
Fe-S iron-sulfur cluster assembly protein, NifU family; KEGG: rxy:Rxyl_1354 1.6e-20 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.713
KRT35299.1
TIGR00268 family protein; KEGG: sat:SYN_00475 1.7e-37 GMP synthase (glutamine-hydrolyzing) K01951; Psort location: Cytoplasmic, score: 8.96.
    
 0.652
KRT36179.1
Carbamoyltransferase HypF; KEGG: mcu:HMPREF0573_10785 7.2e-135 hydrogenase maturation protein K04656; Psort location: Cytoplasmic, score: 8.96.
       0.586
KRT36254.1
KEGG: tai:Taci_0988 4.9e-65 riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
    0.556
KRT36154.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.543
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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