STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT36186.1TrpR family protein YerC/YecD; Psort location: Cytoplasmic, score: 8.96. (103 aa)    
Predicted Functional Partners:
KRT36187.1
Putative histidinol-phosphate transaminase; KEGG: aco:Amico_1039 5.8e-62 aminotransferase class I and II; K00817 histidinol-phosphate aminotransferase; Psort location: Cytoplasmic, score: 9.97.
       0.574
KRT35944.1
Putative transcription factor FapR; Psort location: Cytoplasmic, score: 8.96.
  
     0.505
hisI
KEGG: aco:Amico_0677 6.9e-66 phosphoribosyl-ATP diphosphatase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase; Psort location: Cytoplasmic, score: 9.97; In the N-terminal section; belongs to the PRA-CH family.
 
   
 0.410
KRT34694.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.402
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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