STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT36198.1KEGG: aco:Amico_0854 2.2e-44 thiamine pyrophosphokinase; K00949 thiamine pyrophosphokinase. (242 aa)    
Predicted Functional Partners:
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
     
 0.849
KRT36197.1
FtsK/SpoIIIE family protein; KEGG: eci:UTI89_C0905 1.0e-99 ftsK; DNA translocase FtsK K03466; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the FtsK/SpoIIIE/SftA family.
       0.824
KRT36196.1
TldD/PmbA family protein; KEGG: eci:UTI89_C3675 2.4e-72 tldD; protease TldD K03568; Psort location: Cytoplasmic, score: 9.97.
       0.823
KRT36193.1
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.785
uvrB
Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
       0.773
KRT36194.1
KEGG: aco:Amico_0782 1.4e-49 RNA methyltransferase, TrmH family, group 3; K03218 RNA methyltransferase, TrmH family; Psort location: Cytoplasmic, score: 9.26; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.773
KRT36195.1
Hypothetical protein.
       0.773
KRT36199.1
Hypothetical protein.
       0.773
KRT35863.1
KEGG: apb:SAR116_0843 4.2e-22 FlgK flagellar hook-associated protein 1 K02396; Psort location: Extracellular, score: 9.71.
   
   0.727
KRT35254.1
TENA/THI-4 family protein; KEGG: npu:Npun_R3311 6.3e-56 TenA family transcription regulator; K03707 thiaminase (transcriptional activator TenA).
    
 0.725
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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