STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34525.14Fe-4S binding domain protein; KEGG: tme:Tmel_0121 2.6e-75 dihydroorotate dehydrogenase family protein; K00226 dihydroorotate oxidase; Psort location: Cytoplasmic, score: 9.97. (363 aa)    
Predicted Functional Partners:
KRT35956.1
KEGG: cno:NT01CX_0392 1.9e-31 dihydroorotate dehydrogenase electron transfer subunit K02823; Psort location: Cytoplasmic, score: 9.97.
 0.999
KRT34643.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: aoe:Clos_0277 3.7e-177 molybdopterin oxidoreductase; K00123 formate dehydrogenase, alpha subunit; Psort location: Cytoplasmic, score: 9.97.
 0.994
KRT35120.1
Dihydropyrimidinase; KEGG: ctc:CTC01781 4.1e-84 phenylhydantoinase K01464; Psort location: Cytoplasmic, score: 9.97.
 
 0.986
pyrC
Putative dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
 
 0.984
KRT34807.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: vfi:VF_A0100 1.0e-144 yeiT; oxidoreductase; Psort location: Cytoplasmic, score: 9.97.
 0.981
KRT35343.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: aar:Acear_2301 9.2e-190 NADH dehydrogenase (quinone) K00335; Psort location: Cytoplasmic, score: 9.12.
 
 0.980
KRT34923.1
KEGG: tai:Taci_1436 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
    
 0.973
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
  
 0.966
KRT36433.1
KEGG: bts:Btus_2201 3.0e-255 carbamoyl-phosphate synthase, large subunit; K01955 carbamoyl-phosphate synthase large subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarB family.
 
 0.963
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
   
 
 0.945
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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