STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (217 aa)    
Predicted Functional Partners:
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
 
 0.991
KRT36216.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.
 
 
 0.991
KRT34496.1
Dihydrodipicolinate synthetase family protein; KEGG: cdc:CD196_2789 2.5e-84 putative dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DapA family.
 
 
 0.960
KRT36217.1
Putative aspartate kinase, monofunctional class; KEGG: aco:Amico_0014 2.7e-142 aspartate kinase K00928; Psort location: Cytoplasmic, score: 8.96; Belongs to the aspartokinase family.
 
 
 0.953
KRT35367.1
KEGG: sti:Sthe_0488 2.5e-68 dihydrodipicolinate synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the DapA family.
 
 
 0.906
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
 
 
 0.882
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
 
  
 0.855
KRT34559.1
CBS domain protein; KEGG: aco:Amico_1177 4.2e-272 CBS domain containing protein; K00970 poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
    0.827
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
  
    0.823
KRT35402.1
HDIG domain protein; KEGG: amu:Amuc_1636 6.4e-47 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; Psort location: Cytoplasmic, score: 9.97; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
    0.795
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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