STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT36220.1ABC transporter, ATP-binding protein; KEGG: har:HEAR2680 7.1e-96 high-affinity branched-chain amino acid ABC transporter ATP-binding protein K01995:K01998; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (589 aa)    
Predicted Functional Partners:
KRT35697.1
KEGG: apb:SAR116_0929 1.7e-39 branched-chain amino acid ABC transporter, permease protein K01997; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
KRT36218.1
Ligand-binding protein, receptor family; KEGG: apb:SAR116_0346 1.3e-32 high affinity branched-chain amino acid ABC transporter, amino acid-binding protein K01999; Psort location: Periplasmic, score: 9.76.
 
 
 0.999
KRT36219.1
KEGG: apb:SAR116_0929 9.3e-39 branched-chain amino acid ABC transporter, permease protein K01997; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
KRT34722.1
KEGG: apb:SAR116_1757 5.7e-39 branched-chain amino acid ABC transporter, permease protein K01997; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
0.997
KRT35696.1
Ligand-binding protein, receptor family; KEGG: apb:SAR116_0346 1.3e-41 high affinity branched-chain amino acid ABC transporter, amino acid-binding protein K01999; Psort location: Periplasmic, score: 9.76.
 
 
 0.996
KRT36221.1
ABC transporter, ATP-binding protein; KEGG: dat:HRM2_04910 1.9e-63 livF2; LivF2 K01996.
 
 
0.994
KRT34723.1
Ligand-binding protein, receptor family; KEGG: apb:SAR116_1458 5.4e-13 Leu/Ile/Val-binding protein precursor K01999; Psort location: Periplasmic, score: 9.76.
 
 
 0.994
KRT34719.1
ABC transporter, ATP-binding protein; KEGG: dat:HRM2_21320 2.6e-73 livF3; LivF3 K01996; Psort location: Cytoplasmic, score: 9.12.
 
 
0.979
KRT34774.1
KEGG: bde:BDP_0609 7.5e-53 livF; branched-chain amino acid transport ATP-binding protein LivF K01996; Psort location: CytoplasmicMembrane, score: 9.59.
 
 
0.979
KRT35700.1
ABC transporter, ATP-binding protein; KEGG: dat:HRM2_02750 4.9e-65 livF1; LivF1 K01996; Psort location: CytoplasmicMembrane, score: 9.98.
 
 
0.978
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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