STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT36303.1Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 7.88. (414 aa)    
Predicted Functional Partners:
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
 
   
 0.821
obg
Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
 
     0.768
KRT35889.1
KEGG: bcg:BCG9842_B4399 1.1e-33 csaB; polysaccharide pyruvyl transferase CsaB.
 
   
 0.758
KRT35538.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.716
KRT36160.1
KEGG: aco:Amico_0994 3.2e-109 glycosyl transferase, WecB/TagA/CpsF family K05946; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the glycosyltransferase 26 family.
 
   
 0.688
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.652
KRT35888.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.646
KRT35905.1
Hypothetical protein; KEGG: lsp:Bsph_1990 5.2e-07 5'-nucleotidase precursor K01081; Psort location: OuterMembrane, score: 9.95.
  
  
 0.637
KRT36307.1
Hypothetical protein.
 
     0.633
KRT34441.1
Sporulation and cell division repeat protein; KEGG: pfr:PFREUD_10120 4.4e-09 exopolysaccharide biosynthesis protein precursor (related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase precursor).
 
     0.626
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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