STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34538.1Radical SAM domain protein; KEGG: dat:HRM2_09060 7.9e-16 putative methyltransferase (radical SAM domain); Psort location: Cytoplasmic, score: 8.96. (441 aa)    
Predicted Functional Partners:
KRT35974.1
Hypothetical protein.
  
     0.771
KRT35393.1
Hypothetical protein; KEGG: apb:SAR116_1529 3.1e-22 twin-arginine translocation pathway signal K02035; Psort location: Periplasmic, score: 9.76.
  
     0.638
KRT35395.1
KEGG: csh:Closa_3012 1.8e-20 CoA-substrate-specific enzyme activase; Psort location: Cytoplasmic, score: 8.96.
 
     0.553
KRT35416.1
Hypothetical protein.
 
     0.548
KRT34537.1
KEGG: mct:MCR_0505 3.4e-112 amino acid transport protein K03310; Psort location: CytoplasmicMembrane, score: 10.00.
       0.497
KRT34675.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.454
KRT35766.1
Putative molybdopterin-guanine dinucleotide biosynthesis protein B; Psort location: Cytoplasmic, score: 8.96.
  
     0.447
KRT34677.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.403
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.