STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT36341.1Acetamidase/Formamidase family protein; KEGG: pmo:Pmob_0539 8.6e-52 acetamidase/formamidase; K01426 amidase; Psort location: Cytoplasmic, score: 8.96. (307 aa)    
Predicted Functional Partners:
KRT34561.1
Putative ATP-dependent helicase PcrA; KEGG: aco:Amico_1179 3.0e-184 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
 
      0.731
KRT34572.1
Acetamidase/Formamidase family protein; KEGG: gka:GK1391 6.7e-123 acetamidase/formamidase K01455; Psort location: Cytoplasmic, score: 8.96.
  
     0.648
KRT36342.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.533
KRT36340.1
MOSC domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.524
gatA
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
 
 
 0.482
KRT36337.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.478
KRT36338.1
AroM protein; Psort location: Cytoplasmic, score: 8.96.
       0.478
KRT36336.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.471
KRT36339.1
Hypothetical protein; KEGG: hwa:HQ1359A 3.5e-39 pepB; aminopeptidase (leucyl aminopeptidase, aminopeptidase T); Psort location: Cytoplasmic, score: 8.96.
       0.471
KRT35042.1
AP endonuclease, family 2; KEGG: rba:RB201 1.4e-33 sugar phosphate isomerase/epimerase K01820.
  
  
  0.463
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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