STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT36345.1Putative N-carbamoyl-L-amino-acid hydrolase; KEGG: clj:CLJU_c15280 2.4e-95 amaB1; N-carbamoyl-L-amino acid hydrolase K06016; Psort location: Cytoplasmic, score: 8.96. (412 aa)    
Predicted Functional Partners:
KRT36346.1
Amidohydrolase; KEGG: amt:Amet_2941 1.4e-120 amidohydrolase; Psort location: Cytoplasmic, score: 8.96.
    
  0.769
KRT34594.1
4Fe-4S binding domain protein; KEGG: naz:Aazo_0401 1.5e-15 NADH-plastoquinone oxidoreductase subunit I; K05580 NADH dehydrogenase I subunit I; Psort location: Cytoplasmic, score: 8.96.
  
 
  0.686
KRT34525.1
4Fe-4S binding domain protein; KEGG: tme:Tmel_0121 2.6e-75 dihydroorotate dehydrogenase family protein; K00226 dihydroorotate oxidase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.664
KRT36347.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.652
KRT36391.1
Hypothetical protein; KEGG: sat:SYN_00363 2.6e-31 glutamate synthase [NADPH] small chain; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.621
KRT34807.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: vfi:VF_A0100 1.0e-144 yeiT; oxidoreductase; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.621
KRT36343.1
KEGG: adg:Adeg_0673 2.6e-114 selenocysteine-specific translation elongation factor K03833; Psort location: Cytoplasmic, score: 9.97.
       0.558
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
       0.558
KRT35120.1
Dihydropyrimidinase; KEGG: ctc:CTC01781 4.1e-84 phenylhydantoinase K01464; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.508
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
  
 0.487
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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